Assessment of antibiotic resistance genes in soils polluted by chemical and technogenic ways with poly-aromatic hydrocarbons and heavy metals.

Anthropogenic activities are leaving lots of chemical footprints on the soil. It alters the physiochemical characteristics of the soil thereby modifying the natural soil microbiome. The prevalence of antimicrobial-resistance microbes in polluted soil has gained attention due to its obvious public health risks. This study focused on assessing the prevalence and distribution of antibiotic-resistance genes in polluted soil ecosystems impacted by industrial enterprises in southern Russia. Metagenomic analysis was conducted on soil samples collected from polluted sites using various approaches, and the prevalence of antibiotic-resistance genes was investigated. The results revealed that efflux-encoding pump sequences were the most widely represented group of genes, while genes whose products replaced antibiotic targets were less represented. The level of soil contamination increased, and there was an increase in the total number of antibiotic-resistance genes in proteobacteria, but a decrease in actinobacteria. The study proposed an optimal mechanism for processing metagenomic data in polluted soil ecosystems, which involves mapping raw reads by the KMA method, followed by a detailed study of specific genes. The study's conclusions provide valuable insights into the prevalence and distribution of antibiotic-resistance genes in polluted soils and have been illustrated in heat maps.

Transfer and Degradation of PAHs in the Soil-Plant System: A Review.

Polycyclic aromatic hydrocarbons (PAHs) are highly toxic, persistent organic pollutants that threaten ecosystems and human health. Consistent monitoring is essential to minimize the entry of PAHs into plants and reduce food chain contamination. PAHs infiltrate plants through multiple pathways, causing detrimental effects and triggering diverse plant responses, ultimately increasing either toxicity or tolerance. Primary plant detoxification processes include enzymatic transformation, conjugation, and accumulation of contaminants in cell walls/vacuoles. Plants also play a crucial role in stimulating microbial PAHs degradation by producing root exudates, enhancing bioavailability, supplying nutrients, and promoting soil microbial diversity and activity. Thus, synergistic plant-microbe interactions efficiently decrease PAHs uptake by plants and, thereby, their accumulation along the food chain. This review highlights PAHs uptake pathways and their overall fate as contaminants of emerging concern (CEC). Understanding plant uptake mechanisms, responses to contaminants, and interactions with rhizosphere microbiota is vital for addressing PAH pollution in soil and ensuring food safety and quality.

Hyperspectral imaging for small-scale analysis of Hordeum vulgare L. leaves under the benzo[a]pyrene effect.

Hyperspectral imaging is a newly developed approach to estimate the current state of the plants and to develop the methods of soil and plant ecological state improvement under the effect of different sources. The study was devoted to the novel approach of hyperspectral imaging application in the case of persistent organic pollutants (POP) uptake by plants. Hordeum vulgare L. was used as a test plant and grown on the soil artificially contaminated by benzo[a]pyrene (BaP) in the doses of 20, 100, 200, 400, and 800 ng g-1, which corresponds to 1, 5, 10, 20, and 40 maximum permissible concentrations (MPC) and correlates with the level of soil pollution near industrial facilities in the Rostov Region (Russian Federation). It was analyzed a group of indexes responsible for plants stress, consists of broadband greenness group, narrowband greenness group, light use efficiency group, and leaf pigments group. Benzo[a]pyrene had a stronger effect on the efficiency of the photosynthesis process than on the content of chlorophylls. In the phase of active adaptation to stress in H. vulgare, the content of photosynthetic pigments was increased. The proposed method for selecting spectral profiles by cutting off profiles that do not belong to a plant, based on the NDVI value can be effectively used for the estimation of the plants stress under the BaP contamination and for future perspectives in the most suitable way for the application of the plant's growth stimulants.

Features of the polycyclic aromatic hydrocarbon's spatial distribution in the soils of the Don River delta.

PAHs are one of the most toxic organic compounds classes which is obligatory controlled all over the world. There is a luck of studies devoted to the PAHs levels and sources identification in the south of Russia. The features of the PAHs accumulation and spatial distribution in hydromorphic soils (Fluvisol) were studied on the example of the soils of the Don River delta floodplain landscapes. It has been shown that changes in the PAHs content in soils depended on the type and intensity of the emission source. A factor analysis and multivariate linear regression analysis were carried out to determine the features of the spatial distribution for individual PAH compounds, considering the properties of soils and typical differences in the emission source. The most polluted areas in the studied area located along the transit line of the long-distance tankers, where the content of the most toxic high molecular PAHs compounds reached 8862 ng g-1. As a result of regression analysis, a relationship was established between the PAHs accumulation rate with the content of silt (particles less than 0.001 mm in size) and Ca2+ and Mg2+ exchangeable cations in the soil (at p-level < 0.0001). Differences in individual PAH content for medium and heavy loamy Fluvisol and depend on the influence of different types of pollution sources.

Decrypting the synergistic action of the Fenton process and biochar addition for sustainable remediation of real technogenic soil from PAHs and heavy metals.

The objective of this study was to demonstrate the feasibility and the relevance of combining biochar with the Fenton process for the simultaneous improvement of polycyclic aromatic hydrocarbons (PAHs) degradation and immobilization of heavy metals (HMs) in real soil remediation processes at circumneutral pH. The evaluation of PAHs degradation results was performed through multivariate statistical tools, including principal component analysis (PCA) and partial least squares (PLS). PCA showed that the level of biochar amendment decisively affected the degree of degradation of total PAHs, highlighting the role of biochar in catalyzing the Fenton reaction. Moreover, the PLS model was used to interpret the important features of each PAH's physico-chemical properties and its correlation to degradation efficiency. The electron affinity of PAHs correlated positively with the degradation efficiency only if the level of biochar amendment sat at 5%, explained by the ability of biochar to transfer the electrons to PAHs, improving the Fenton-like degradation. Moreover, the addition of biochar reduced the mobilization of HMs by their fixation on their surface, reducing the Fenton-induced metal leaching from the destruction of metal-organic complexes. In overall, these results on the high immobilization rate of HMs accompanied with additional moderate PAHs degradation highlighted the advantages of using a biochar-assisted Fenton-like reaction for sustainable remediation of technogenic soil.

Intra-soil waste recycling provides safety of environment.

Amelioration and remediation technology was developed for phosphogypsum utilization in Haplic Chernozem of South-European facies (Rostov Region). The technology comprises phosphogypsum dispersed application into the soil layer of 20-45 cm during intra-soil milling. In the model experiment, the phosphogypsum doses 0 (control), 10, 20, and 40 t ha-1 were studied. The Cd thermodynamic forms in soil solution were calculated via the developed mathematical chemical-thermodynamic model and program ION-3. The form of ion in soil solution (or water extract) was considered accounting the calcium-carbonate equilibrium (CCE) and association of ion pairs CaCO30; CaSO40, MgCO30, MgSO40, CaHCO3+, MgHCO3+, NaCO3-, NaSO4-, CaOH+, MgOH+. For calculation of the equilibrium of microelements concentration in soil solution ion including heavy metals (HMs), the coefficient of microelement association kas was proposed. According to calculations, Cd2+ ion in soil solution was mostly bounded to associates CdOH+, partly to associates CdCO30 and CdHCO3+. The calculated kas of Cd was 1.24 units in the control option of experiment and decreased to 0.95 units at phosphogypsum dose 40 t ha-1. The ratio of "active [Cd2+] to total Cd" reduced from 33.5% in control option to 28.0% in the option of phosphogypsum dose 40 t ha-1. The biogeochemical barrier for penetration of HMs from soil to plant roots was high after application of phosphogypsum. According to calculation by ION-3, the standard soil environmental limitations overestimate the toxicity of Cd in soil solution. New decision for intra-soil milling and simultaneous application of phosphogypsum was developed to provide the environmentally safe waste recycling.

Influence of carbon-containing and mineral sorbents on the toxicity of soil contaminated with benzo[a]pyrene during phytotesting.

Benzo[a]pyrene (BaP) is a member of polycyclic aromatic hydrocarbons known for high persistency and toxicity. Technologies of BaP sorption through solid matrixes have received relatively more attention. The present study was devoted to the phytotesting investigations of two different groups of sorbents, such as carbonaceous, including biochar and granulated activated carbon (GAC), and mineral, including tripoli and diatomite. Evaluation of the BaP removing efficiency was carried out using the phytotesting method with spring barley in Haplic Chernozem contaminated with different levels of contamination (200 and 400 µg kg-1 BaP). The sorbents' efficiency for BaP remediation was estimated in the sorbents doses from 0.5 to 2.5% per kg of soil. It was shown that biochar and GAC decreased the soil toxicity class to a greater extent than mineral sorbents ones. The effect intensified with an increase in applying sorbents doses. The optimal dose of carbonaceous sorbents into the soil contaminated with 200 µg kg-1 was 1%, decreasing the BaP content up 57-59% in the soil. Simultaneously, the optimal dose of the mineral sorbents was found to be 1.5%, which decreased the BaP content in the soil up 41-48%. Increasing the BaP contamination level up to 400 µg kg-1 showed the necessity of a sorbent dose increasing. In these conditions, among all applied sorbents, only 2% GAC could reduce the soil toxicity class to the normal level up to 0.91-1.10. It was shown that BaP tended to migrate from the soil to the roots and further into the vegetative part of barley.

The effect of combined pollution by PAHs and heavy metals on the topsoil microbial communities of Spolic Technosols of the lake Atamanskoe, Southern Russia.

The contamination with organic and inorganic pollutants changes significantly soil microbial community structure. These shifts indicate anthropogenic pressure and help to discover new possibilities for soil remediation. In this study, the microbial community structure of Spolic Technosols formed at the territory of a former industrial sludge reservoir near the Kamensk-Shakhtinsky (Southern Russia) was studied using a metagenomics approach. The studied soils contain high concentrations of heavy metals (HM) (up to 72,900 mg kg-1) and 16 priority polycyclic aromatic hydrocarbons (PAHs) (up to 6670 mg kg-1). Its microbial communities demonstrate an excellent adaptability level reflected in their complexity and diversity. As shown by the high values of alpha diversity indices (Shannon values up to 10.1, Chao1 values from 1430 to 4273), instead of decreasing quantitatively and qualitatively on the systemic level, microbial communities tend to undergo complex redistribution. Regardless of contamination level, the share of Actinobacteria and Proteobacteria was consistently high and varied from 20 to 50%. Following the results of the Mann-Whitney U test, there were significant changes of less abundant phyla. The abundance of oligotrophic bacteria from Gemmatimonadetes and Verrucomicrobia phyla and autotrophic bacteria (e.g., Nitrospira) decreased due to the high PAH's level. And abundance of Firmicutes and amoebae-associated bacteria such as TM6 and soil Chlamydia increased in highly contaminated plots. In the Spolic Technosols studied, the influence of factors on the microbial community composition decreased from PAHs concentration to soil characteristics (organic carbon content) and phylum-phylum interactions. The high concentrations of HMs influenced weakly on the microbial community composition.